Quick update, got the truss rod installed with a few dabs of silicone. I put 5 dots behind the rod: one under each end, and 3 others spaced out evenly. Let it sit for an hour or two, come back and it rattles when I go a'rapping on the neck. Would this be because the fretboard isn't on? I hope I don't have to do some surgery on the guitar if I get it up and running. Maybe it's because it isn't exerting any pressure against the strings, and this will go away.
Should I take any precautionary measures to fix this now, or will it go away on its own? I've read of people thinning down rubber cement and pouring it into the channel as repair work...
Also shaped the headstock up to 80grit. I traced the outline and more or less freehanded the whole thing, so it's a bit different in shape than the other two, but that's cool with me. The headstock is 11/16" thick. Thinking of keeping it thick and recessing the tuners from the front. Here is a picture from Hector's PRS, to get a sense of what I'm talking about. More sustain with a thicker headstock (how much difference will it make? who knows!), and a sharper break angle over the strings (how much difference.....etcetc. ). Not too worried about headstock dip, as my plans put the top horn between the 11th and 12th frets, a good balance point. I'm going to use the open-back tuners from Sperzel, much lighter than their others.
Moving back to campus tomorrow, so I don't know how much progress there will be for the next month or so. I'm planning on gluing up the fretboard tomorrow, just to get another step in progress before I move back. Hopefully I'll get a reply about the truss rod before then.
::EDIT::
I was wondering if anyone had any opinion on the "back of the guitar angled jack" placement like Perry's Vine guitar? Almost like an Ibanez S series jack setup on the back of the guitar. I'm just a bit concerned about drilling a jack recess of 5/8" and then a jack hole, on the guitar side that only has 3/4" of thickness to do so. It's a bit hairy, tight tolerances and all. I wanted to do a JEM jack before I decided to put bevels around the edges.